Breakfast Egg Muffins with Bacon

Featured in: Morning Kitchen Ideas

Whisk eggs with milk until frothy, then fold in shredded cheddar, diced bell peppers, onions, and crumbled bacon. Season simply with salt, pepper, garlic powder, and paprika. Pour into greased muffin tins and bake at 350°F for 18–20 minutes until set and golden. Let cool briefly before removing from the tin. These handheld breakfast muffins store beautifully in the refrigerator for up to 5 days or freeze for longer storage. Simply reheat in the microwave for a quick warm breakfast on busy weekdays.

Updated on Mon, 02 Feb 2026 13:04:00 GMT
Golden-brown Breakfast Egg Muffins with melted cheddar, crisp bacon, and vibrant bell peppers on a rustic wooden board. Save
Golden-brown Breakfast Egg Muffins with melted cheddar, crisp bacon, and vibrant bell peppers on a rustic wooden board. | dailyhlib.com

One Sunday morning, I was staring at leftover bacon and a carton of eggs, trying to figure out how to feed five people without standing over the stove for an hour. I had a muffin tin sitting in the cabinet and thought, why not pour everything in there and let the oven do the work? Twenty minutes later, I had a dozen golden egg muffins that disappeared faster than I could cool them. That lazy experiment became my most-requested breakfast, especially when friends stay over and I want to look like I have my life together.

I started making these every Sunday night after my neighbor mentioned she was spending a fortune on drive-through breakfast sandwiches. I brought her a container of these muffins, and she texted me two days later asking for the recipe. Now we both prep them together sometimes, swapping out ingredients and taste-testing each others versions. Its become less about the recipe and more about the routine.

Ingredients

  • Eggs: The foundation of the whole muffin, and using large eggs keeps the texture consistent and fluffy.
  • Milk: A splash of milk makes the eggs tender instead of rubbery, and whole milk works best for richness.
  • Shredded cheddar cheese: Melts beautifully and adds a sharp, salty bite that balances the vegetables.
  • Diced bell peppers: I like using a mix of colors for visual appeal, and they add a slight sweetness and crunch.
  • Diced onions: Yellow or white onions work well, and dicing them small ensures they cook through without overpowering.
  • Cooked and crumbled bacon: Pre-cooking the bacon is key so it stays crispy and doesnt release too much grease into the muffins.
  • Salt, black pepper, garlic powder, and paprika: These seasonings add depth without overwhelming the egg base, and the paprika gives a subtle warmth.
  • Cooking spray or olive oil: Greasing the tin well prevents sticking and makes cleanup so much easier.

Instructions

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Preheat and Prep:
Set your oven to 350°F and generously grease every cup of a 12-cup muffin tin. Dont skip the greasing or youll be scraping muffins out later.
Whisk the Egg Base:
In a large bowl, whisk together the eggs and milk until the mixture is smooth and slightly frothy. This aeration helps the muffins puff up nicely.
Mix in the Fillings:
Stir in the cheddar, bell peppers, onions, bacon, salt, pepper, garlic powder, and paprika until everything is evenly distributed. The mixture should look colorful and chunky.
Fill the Muffin Cups:
Pour the egg mixture into each muffin cup, filling them about two-thirds full to leave room for rising. Try to distribute the fillings evenly so every muffin has a good mix.
Bake Until Golden:
Bake for 18 to 20 minutes, checking around the 18-minute mark. Theyre done when the tops are lightly golden and a toothpick comes out clean.
Cool and Remove:
Let the muffins cool in the tin for about 5 minutes, then gently run a knife around the edges to loosen them. They should pop out easily if the tin was greased well.
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Easily open jars, bottles, and cans while cooking, making meal prep smoother and less frustrating.
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Freshly baked Breakfast Egg Muffins served warm, showcasing fluffy texture with colorful peppers and onions in a muffin tin. Save
Freshly baked Breakfast Egg Muffins served warm, showcasing fluffy texture with colorful peppers and onions in a muffin tin. | dailyhlib.com

The first time I served these at a brunch, my friend who claims she doesnt like eggs ate three in a row. She said it was the cheese and bacon that won her over, but I think it was the fact that they didnt taste like typical scrambled eggs. These little muffins have a way of converting people who think they dont like breakfast foods.

Storing and Reheating

Once the muffins have cooled completely, stack them in an airtight container with a piece of parchment paper between layers if youre feeling fancy. They stay fresh in the fridge for up to five days, and I just microwave one for about 30 seconds when Im ready to eat. If you want to freeze them, wrap each muffin individually in plastic wrap, toss them all in a freezer bag, and theyll keep for up to three months.

Customizing Your Muffins

This recipe is forgiving and practically begs you to experiment. Ive swapped bacon for crumbled sausage, added handfuls of spinach, and even tried feta with sun-dried tomatoes when I was feeling adventurous. My sister makes a vegetarian version with mushrooms and zucchini, and honestly, its just as satisfying. The egg base stays the same, so you can throw in whatever sounds good or needs to be used up.

Serving Suggestions

I usually serve these warm with a little salsa or hot sauce on the side, which adds a nice kick and keeps things interesting. Theyre also great alongside fresh fruit or a handful of mixed greens if youre trying to feel virtuous. On weekends, I sometimes plate them with avocado slices and a sprinkle of flaky salt, which makes them look fancy without any extra effort.

  • Top with salsa, hot sauce, or a dollop of sour cream for extra flavor.
  • Pair with fresh fruit, toast, or a simple side salad.
  • Pack them in lunchboxes or take them on road trips for easy protein on the go.
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A platter of handheld Breakfast Egg Muffins, perfect for meal prep, topped with crumbled bacon and shredded cheddar cheese. Save
A platter of handheld Breakfast Egg Muffins, perfect for meal prep, topped with crumbled bacon and shredded cheddar cheese. | dailyhlib.com

These egg muffins have saved me on more mornings than I can count, and theyve become a staple I dont think Ill ever stop making. Theyre simple, satisfying, and somehow always taste better than I remember.

Recipe FAQs

Can I make these egg muffins ahead of time?

Yes, these muffins are perfect for meal prep. Once cooled completely, store them in an airtight container in the refrigerator for up to 5 days. They reheat beautifully in the microwave for about 30–60 seconds.

Can I freeze breakfast egg muffins?

Absolutely. Freeze cooled muffins in a freezer-safe bag or container for up to 3 months. Thaw overnight in the refrigerator and reheat before serving.

What other proteins can I use instead of bacon?

Cooked sausage, diced ham, or crumbled turkey bacon work well. For a vegetarian version, omit the meat entirely and add spinach, mushrooms, or extra vegetables.

How do I know when the muffins are done baking?

The muffins are ready when they're set and lightly golden on top. A toothpick inserted in the center should come out clean. They should not be jiggly or runny.

Can I use different vegetables?

Yes, try spinach, diced tomatoes, mushrooms, or zucchini. Just keep the total vegetable amount around 1 cup to maintain proper texture and baking time.

What other cheeses work well?

Feta, mozzarella, Swiss, pepper jack, or Mexican blend all create delicious variations. Just use shredded cheese for even melting throughout.

Breakfast Egg Muffins with Bacon

Golden egg muffins packed with cheddar, bacon, and bell peppers—perfect make-ahead breakfast for busy mornings.

Prep time
10 minutes
Time to cook
20 minutes
Total duration
30 minutes
Created by Declan OBrien


Skill level Easy

Cuisine type American

Makes 6 Number of servings

Dietary info No gluten, Low carb

Needed ingredients

Eggs & Dairy

01 6 large eggs
02 1/2 cup milk
03 1/2 cup shredded cheddar cheese

Vegetables

01 1/2 cup diced bell peppers (red, green, or yellow)
02 1/2 cup diced onions

Proteins

01 1/2 cup cooked and crumbled bacon

Seasonings

01 1/2 teaspoon salt
02 1/4 teaspoon black pepper
03 1/4 teaspoon garlic powder
04 1/4 teaspoon paprika

For Greasing

01 Cooking spray or olive oil for muffin tin

How to make it

Step 01

Preheat Oven: Preheat oven to 350°F.

Step 02

Prepare Muffin Tin: Grease a standard 12-cup muffin tin with cooking spray or olive oil.

Step 03

Combine Eggs and Milk: In a large mixing bowl, whisk together eggs and milk until well combined and slightly frothy.

Step 04

Mix Ingredients: Stir in cheddar cheese, bell peppers, onions, bacon, salt, black pepper, garlic powder, and paprika until evenly mixed.

Step 05

Fill Muffin Cups: Pour the mixture into the prepared muffin tin, filling each cup approximately two-thirds full.

Step 06

Bake Muffins: Bake for 18 to 20 minutes, or until muffins are set and lightly golden. A toothpick inserted in the center should come out clean.

Step 07

Cool and Remove: Remove from oven and let cool for 5 minutes. Carefully loosen muffins with a knife if needed and remove from tin.

Step 08

Serve or Store: Serve warm, or cool completely and store in an airtight container in the refrigerator for up to 5 days. Reheat in the microwave before serving.

Tools you'll need

  • 12-cup muffin tin
  • Large mixing bowl
  • Whisk
  • Measuring cups and spoons
  • Knife and cutting board

Allergy details

Look into every ingredient for allergens and check with a doctor if you're unsure.
  • Contains eggs and dairy
  • May contain pork depending on protein choice
  • Gluten-free as written, but verify labels on sausage or other add-ins

Nutrition details (per serving)

Nutrient details are for reference and aren't a substitute for doctor's advice.
  • Calories: 150
  • Total fat: 10 grams
  • Carbohydrates: 2 grams
  • Proteins: 11 grams